BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D06SP1|AL428373
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1742 1702 0.0
>3x_Contig1742
Length = 17167
Score = 1702 bits (858), Expect = 0.0
Identities = 865/868 (99%)
Strand = Plus / Plus
Query: 1 tctcttgtttccgtttactagtggtcttcggtgattcattattgacatatttttttcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4693 tctcttgtttccgtttactagtggtcttcggtgattcattattgacatatttttttcgca 4752
Query: 61 gtcgtcgccagttcgaaccctcattcgatcctaactgccatcaattgtttcttttacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4753 gtcgtcgccagttcgaaccctcattcgatcctaactgccatcaattgtttcttttacata 4812
Query: 121 tactacttatatgtttgtcttttctgtttttattcgtaatcctatttccctcccatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4813 tactacttatatgtttgtcttttctgtttttattcgtaatcctatttccctcccatgctt 4872
Query: 181 tatttcgctcaattttaatacattttccagacataatacgatgagccttccatctatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4873 tatttcgctcaattttaatacattttccagacataatacgatgagccttccatctatctt 4932
Query: 241 ccttgtttcactcttctaaaawacgtcagttgatgcatggatctcgatctgctgcggcca 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4933 ccttgtttcactcttctaaaatacgtcagttgatgcatggatctcgatctgctgcggcca 4992
Query: 301 attgtacgggtgcgttacttttcttacattaataataatttctctctctatggcggttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4993 attgtacgggtgcgttacttttcttacattaataataatttctctctctatggcggttct 5052
Query: 361 gccctgcccactttgtaactattttgagaatccacttagtttttctgaatcttatattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5053 gccctgcccactttgtaactattttgagaatccacttagtttttctgaatcttatattgt 5112
Query: 421 atctttactatttggtgataattataattgtaatattgaatgttaagtatatattgtatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5113 atctttactatttggtgataattataattgtaatattgaatgttaagtatatattgtatt 5172
Query: 481 tattctaagagcttagaattaaagctcactttttttttcttggaaatggaacggtcaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5173 tattctaagagcttagaattaaagctcactttttttttcttggaaatggaacggtcaact 5232
Query: 541 agcccaatataataccagaactaatcccgttactgcccaattttttgtttctcaacagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5233 agcccaatataataccagaactaatcccgttactgcccaattttttgtttctcaacagac 5292
Query: 601 tatatcaggagtgtcagtctacatgccgaattcgttggatcttgacgtcgaagtggattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5293 tatatcaggagtgtcagtctacatgccgaattcgttggatcttgacgtcgaagtggattg 5352
Query: 661 gttatataaggggaagaagaaggtcagagcgaataggagattggactcctcttcagctcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5353 gttatataaggggaagaagaaggtcagagcgaataggagattggactcctcttcagctcc 5412
Query: 721 accggctactccctctgctcctgctcctgcttccacttctgttcctactcctgctcctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5413 accggctactccctctgctcctgctcctgcttccacttctgttcctactcctgctcctgg 5472
Query: 781 gtctgctggtgttgcagaagcaacacagggggctggcactgacggtgctggaccagagaa 840
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5473 gtctgctggtgttgcagaagcaacaccaggggctggcactgacggtgctggaccagagaa 5532
Query: 841 ctctgcaagttcagaacctgctcaaact 868
||||||||||||||||||||||||||||
Sbjct: 5533 ctctgcaagttcagaacctgctcaaact 5560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7347
Number of Sequences: 1807
Number of extensions: 7347
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)